Analyzing Wildlife Data with Detection Error

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Documentation for package ‘detect’ version 0.5-0

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detect-package Analyzing Wildlife Data with Detection Error
AUC AUC ROC plot for fitted models
bootstrap Do bootstrap and extract bootstrap results
cmulti Conditional Multinomial Maximum Likelihood Estimation
cmulti.fit Conditional Multinomial Maximum Likelihood Estimation
cmulti2.fit Conditional Multinomial Maximum Likelihood Estimation
convertEDR Conversion between truncated and unlimited effective detection distance (EDR)
databu Simulated example for abundance model
datocc Simulated example for occupancy model
detect Analyzing Wildlife Data with Detection Error
extractBOOT Do bootstrap and extract bootstrap results
extractMLE ZI Binomial model with single visit
fitted.cmulti Conditional Multinomial Maximum Likelihood Estimation
fitted.sqpad Single-bin QPAD (SQPAD)
hbootindex Hierarchical bootstrap indices
is.present Single visit N-mixture abundance models
josm Bird point count data from Alberta's Oil Sands region
load_BAM_QPAD Load BAM QPAD parameter estimates and support functions
logLik.sqpad Single-bin QPAD (SQPAD)
model.frame.cmulti Conditional Multinomial Maximum Likelihood Estimation
model.matrix.cmulti Conditional Multinomial Maximum Likelihood Estimation
oven Ovenbird abundances
paired Example point count data set with paired human and ARU data
predict.cmulti Conditional Multinomial Maximum Likelihood Estimation
predict.sqpad Single-bin QPAD (SQPAD)
predictMCMC Single visit N-mixture abundance models
print.sqpad Single-bin QPAD (SQPAD)
print.summary.sqpad Single-bin QPAD (SQPAD)
rocplot AUC ROC plot for fitted models
sqpad Single-bin QPAD (SQPAD)
sqpad.fit Single-bin QPAD (SQPAD)
summary.sqpad Single-bin QPAD (SQPAD)
svabu Single visit N-mixture abundance models
svabu.fit Single visit N-mixture abundance models
svabu.step Single visit N-mixture abundance models
svabu_nb.fit Single visit N-mixture abundance models
svocc ZI Binomial model with single visit
svocc.fit ZI Binomial model with single visit
svocc.step ZI Binomial model with single visit
vcov.sqpad Single-bin QPAD (SQPAD)
zif Single visit N-mixture abundance models