2013-12-5 Youyi Fong and Krisz Sebestyen
    * create package

2014-4-1 Youyi Fong
    * change .C to .Call

2014-7-1 Krisztian Sebestyen
    * fixed the weighted hamming and ibs kernel code both in R and C (typo in the paper) 
    * separate .Call from native C code in kernels.c/h and matrix.c/h so that C code may be included in other packages without having to include
    Rinternals.h library (i.e. SEXP stuff)
      - created files Call_kernels.c and Call_matrix.c
      - renamed all C functions called via .Call to 'Call_funcname'
    * updated runit.kernel.R since ibs() has changed
    * added rrbind(),rcbind(),upper.trap(),lower.trap() to matrix2.R
    * with .Call I can pass a NULL pointer to C hence I can use more natural 'NULL' logic in C in many functions

2018.07.01
    * Add %.% and deprecate %+% because %+% is also defined in ggplot2 for
    adding a comment to plot
    * Replace %+% by %.% throughout 

2018.10.17
    * Modify get.sim.res to handle the case when the file contains a single
    value
    * Fix a bug in mytex that happens when saving to the current directory
    * Make getFormattedSummary more flexible by allowing different paramemters
    to be printed with different number of significant digits
    * Update mypairs to generate a ladder plot

2019.01.18
    * Fix an error in fixedef.lm

2019.08.02  
    * Print dir if get.sim.res throws an error due to empty dir

2019.10.14
    * Fix a bug in mytex that occurs when writing a list of tables and the row names have duplicates

2019.11.13
    * add paired option to myboxplot.list to allow paired Wilcox test

2020.04.11
    * Add INT and rank.inv.norm
    * Enhance cbinduneven so that it works with list of outputs from table() of a single dimension

2020.05.11
    * return CI in VEplot as suggested by Betz

2020.06.19
    * implement myprint for matrix

2020.08.22
    * add marginal.risk

2020.08.26
    * add marginal.risk.boot

2020.08.26
    * add p.adj.perm

2020.09.02
    * add binaryloess

2020.09.16
    * change rnorm.cor to rnorm.ar, change function interfact too
    * make exact suggests not import
    * fix a bug in formatDouble that drops non-trailing 0s

2020.09.25
    * add iorw

2020.10.3
    * fix getFixedEf.coxph so that the non-robust p value is correct
    * add getFixedEf.svycoxph 

2020.10.12
    * freeze for CoVPN work

2020.11.5
    * modify getFormattedSummary

2020.11.16
    * update marginal.risk to work with model fits from both lm and svyglm for the marker model

2020.11.19
    * add marginal.risk.cat

2020.11.19
    * add marginal.risk.cont

2020.11.24
    * fix marginal.risk.boot

2020.12.2
    * remove marginal.risk functions to a new package

2020.12.24
    * add get.kfold.splits

2020.12.29
    * update corplot.formula: change main

2020.1.4
    * Update getFixedEf

2020.1.11
    * Update getFormattedSummary

2020.2.2
    * Update mymatplot

2020.2.13
    * Update getFormattedSummary

2020.3.9
    * Add date to Description

2020.4.13
    * Add add.loess to corplot

2020.5.7
    * Add support for longtable to mytex

2020.6.16
    * Update getFormattedSummary on how p values are reported when it is below a threshold

2021.10.27
    * Add split functions

2021.04.05
    * Change F77 call to be more portable

2022.07.17
    * Add predict.competing.risk

2022.08.02
    * Add imaging_spatial_analysis

2022.09.17
    * Update manual for predictCompetingRisk

2023.02.02
    * Fix typo in ?prc2

2023.04.24
    * Add dec_to_binary and cove.boost.collapse.strata

2023.04.26
    * Add marker.name.to.assay and put this function and
	cove.boost.collapse.strata in for_correlates_repos.R

2023.05.31
    * Bug fix p.adj.perm from Sue Li

2023.06.05
    * Remove trim function, which is also present in glue package

2023.06.10
    * update pcr2 to handle the situation when there are no competing events

2023.06.11
    * add trim back because glue is not as good as paste0, no better to have
	trim in kyotil so that there is no need to load glue just for trim

2023.06.12
    * update pcr2 

2023.06.13
    * make myfigure and mytex silent by default

2023.06.15
	* when there are no cases of interest, return NA

2023.07.19
	* update cove.boost.collapse.strata

2023.07.20
	* make ph2 factor in cove.boost.collapse.strata

2023.11.22
	* move auc functions from aucm to kyotil
