2f5c04f7215512ef8cad242bdd159e8a *DESCRIPTION
5fd74249a277185d489457cda77032e9 *NAMESPACE
cd2270f1a78e97ca16640d3f1891c991 *NEWS
39636112309b05ace74b2a346cc16ab4 *R/F234.R
2f74993a56af3f51411ec27945e3c943 *R/Fst.R
fb8410dc046588ee88c45b4d2a62b302 *R/IO.R
4e8e5d7e4edf1d125a7524b534edf1a4 *R/MMD.R
6ea2fd29cfe6178ece04bbf02ca98f74 *R/R2.test.R
b28a8dac1102558f9a497cdcf99c5ad5 *R/VCFloci.R
980ab64ef43b30c0f0e4895783431a61 *R/allelicrichness.R
dc7445230e1d6b5823fc64f42126db55 *R/amova.R
3c29b8810ce36288134e2c3ca69918b6 *R/conversion.R
6a41da008c1e86da23dbf402e7fa7cba *R/dist.asd.R
16eed227259cb51cfa235839491cb86e *R/geo.R
151204abec5a6b763d7c000e5f3d3666 *R/haplotype.R
d91264f0be988e5c084db65520755051 *R/heterozygosity.R
7511be46ac5c58a664cbd6515e745f96 *R/hw.test.R
b3e70ec1b335b38f2d2c41368e853789 *R/mjn.R
e22823d33ca3ee546246500b021ce007 *R/nuc.div.R
5a6758d63c43b99092ee75d53761ea3c *R/plot.loci.R
9618de40a0bc87dc124a0c49e38bf012 *R/plotNetMDS.R
215db9edbdc18ae1ad5dee3869815afa *R/rr.test.R
6109855be0e66abe79e2e06f962be413 *R/site.spectrum.R
0ed51b7e358e7286abd0acf30b0fb1af *R/stairway.R
31b753ca34f3b8421f9653f821cafb05 *R/summary.loci.R
6888ed20ba859e38c49644353adc8465 *R/sw.R
eca76dd03f28d5a337765a8e3fcc1c81 *R/tajima.test.R
201ea02ceb2792b319ac2d1cf69651ed *R/theta.R
bc29fb75b19649a905a9b4866f2a7f2d *R/zzz.R
ae02e557de2ac3f3602480a396f64818 *build/vignette.rds
28851c59cc5535f917122a87b4808461 *data/jaguar.rda
ad12dc674e3012ec9d8b003ccb02f404 *inst/CITATION
f17de9c5502c5d143bd031194e21a915 *inst/doc/ReadingFiles.R
f7936522eec2aa6d27148db28469f88f *inst/doc/ReadingFiles.Rnw
82faef23e4030539e2f0ef325021491e *inst/doc/ReadingFiles.pdf
77694ca00164a6ccd55620a2e825c981 *man/F234.Rd
fcc1298488f2733a4d16386802962313 *man/Fst.Rd
bc5dd68a2223cc35a808965454ec6518 *man/LD.Rd
4a15e3c2876a9762466d589c67af978c *man/LDscan.Rd
4cc088f0000a02bb268e079d2b1097eb *man/MMD.Rd
cbc53cd9777e7548f36d399ea3d52e17 *man/R2.test.Rd
7a7b1dd4b4f043ae6211b543213e9293 *man/VCFloci.Rd
738957e217dfb1383f0699f18d935b63 *man/all.equal.haploNet.Rd
4a81b8a8b2a9c5bff949e00b67b90d41 *man/alleles2loci.Rd
d4f9b55ebdeb28a3aefc27f54a30c336 *man/allelicrichness.Rd
c40b741eb0a1cfaee53dbc524c753f26 *man/amova.Rd
b68d5272f35efcb1185c24a242c202bf *man/bind.loci.Rd
616768873dc46ead972abdce08fc25c9 *man/by.loci.Rd
c6818a5a77dfc50459984d5c5b67e7eb *man/conversion.Rd
9fb44056cc29c3c10b9221a6aff3ad07 *man/diffHaplo.Rd
f62c3fd475d54a1fe04aa5ef7352f1cd *man/dist.asd.Rd
db82a7c62f3b2bffc1f2b6fa063aa1cf *man/dist.hamming.Rd
6bf8595c60f60f41f285d5a60c590179 *man/edit.loci.Rd
fcaec3dff76bbbdca7804c935c5e8de1 *man/geoTrans.Rd
42d34758c5590451d3cb8ec5fa35082f *man/geod.Rd
e716c00774d7308944ff8907f45a5b66 *man/hap.div.Rd
8f37055beb58c52d8f59697a091c99df *man/haploFreq.Rd
e5b40cf8cc023660eaf8a45b476ca3e6 *man/haploNet.Rd
f49468a9cd0973edbca801dfe4e7873b *man/haplotype.Rd
56e5a094053e7feacabf590a4fd001f4 *man/haplotype.loci.Rd
526372074b746df997a28d451f340283 *man/heterozygosity.Rd
d9050020d9bc0d81861ec5ff453f11d7 *man/hw.test.Rd
3f4470818c0ab58aa0113dc84c5ae9fe *man/jaguar.Rd
73c4fa06bb9d21ee5faddee102996542 *man/mjn.Rd
ee5de1d90a4409c1a5defbd0501c5f9b *man/mst.Rd
f9737fd9245d639a2944727d63169262 *man/na.omit.loci.Rd
3b87ea408feeaf59512d68e2b742837c *man/nuc.div.Rd
5567e7148787b80fa40577366a936c0d *man/pegas-package.Rd
f1138e498b9101ba93a48be19940dc8f *man/plotNetMDS.Rd
b849eaa277242050aebfd5c8048735a6 *man/read.gtx.Rd
7835e9350fd87adc379c3c113901bc9a *man/read.loci.Rd
fc7e3f61f540927680411b4b1f12efac *man/read.vcf.Rd
fe3eadb4d1846602818b544c68a36c84 *man/replot.Rd
651f6ccff60df1161dedebb9a404dda2 *man/rr.test.Rd
bbec29e8bc3d0760f4f259a3abc1043d *man/site.spectrum.Rd
2d1a79bddf00f04ed2337b1cdef1a25a *man/stairway.Rd
72de3bbcd9d8db4e54854861c136f53e *man/subset.haplotype.Rd
488184bf9c344b6dd3a8ec3f4a8263a8 *man/summary.loci.Rd
79b167b2fe67b8e3639b08bb76694489 *man/sw.Rd
1fba696d393e38e6925252c166284ce6 *man/tajima.test.Rd
f1a6ea2bf2169cc5846ed356944020a2 *man/theta.h.Rd
aa7aeadb72990f457212669f28aa2562 *man/theta.k.Rd
7211d235f15922b9af1546f156bb877b *man/theta.msat.Rd
1b373c22dbf415819bb002850d9b52f5 *man/theta.s.Rd
be86569a182a335821927d3719fa9a96 *man/theta.tree.Rd
5c37f7454999fbc93657d9bad00bcf47 *man/utilities.Rd
799f5a475b1415b09464f3dca0a56b0c *man/write.loci.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
1be6fe77cd312d0c92d04df88d3ae0f8 *src/pegas.c
f5fbde4f4dddd28ee5db87d314568a6f *src/readVCFbin.c
ca521b4823423ed4af9bcdbcaab3a635 *src/summary_loci_pegas.c
f7936522eec2aa6d27148db28469f88f *vignettes/ReadingFiles.Rnw
e88eba941fc88be5e1eb2dae9594675b *vignettes/pegas.bib
84278f2d0229fb87dda308b1551cb2a3 *vignettes/tata
2964da1756e3a2c2bd02c7235cb2fa2f *vignettes/titi
619c909499f3a837b8c62484905aa7bc *vignettes/toto
e59fd7d2d1e692488df7701530016ec0 *vignettes/tutu
958cceda906e9b37a685a4340d8d0b88 *vignettes/tyty
