6a6f87ac53b4e72c71501dde76e0a6b7 *DESCRIPTION
48472bcb60b64abc86e1aedbb598ec64 *NAMESPACE
33aee1455066b060098af2e75f0c8077 *R/RcppExports.R
b2cd57278fcc2227cf13c654ea490641 *R/data.R
11478ea1994fde91d20991ef482c8709 *R/utils.R
eef68c74e5597a930a2fe6d30b2364e6 *R/wrapper.R
caf72ddeaeb347fe18a9fd4eecb237fc *R/zzz.R
69cf9b7f9fce27ba463c564122445bdc *build/vignette.rds
0add247dcd2a1f36fbc17b89c0851284 *inst/doc/intro.R
fe33c55956fb34f9cd9f91b707d3975e *inst/doc/intro.Rmd
13a41851d38cc5ef1717ca8abf96753c *inst/doc/intro.html
5ecfebfa64f7d8cc5705bf9b76f3d28e *inst/extdata/CASMAP_example_covariates_1.txt
ae25f7af6cd41880e85fa77d7385d450 *inst/extdata/CASMAP_example_data_1.txt
7d1130ab6b07d427e6c82b66af5c68cd *inst/extdata/CASMAP_example_labels_1.txt
8d56f7f70bcb73fd7aca7eb4b05c6e94 *inst/extdata/CASMAP_example_sig_regions_1.txt
7f83bf2a118f84462673856650852fd2 *inst/include/ArrayFile.h
374bcc4b5bcb3dd935867cd52f8a0a1f *inst/include/CASMAP.h
26f5fc9d4946f458a38ad1155001c04a *inst/include/CumulativeTimeMeasurement.h
e0623f2a3cd43cb829c3841b60ee5bb1 *inst/include/Exception.h
c9d1b8408ac157a3fae42db54f5523b8 *inst/include/FeatureSet.h
91ddf8a4d239f6d8678fa96ffbedd6b3 *inst/include/FilterIntervals.h
dc42c314c0ff246ca5ae3ec99eb9e5ea *inst/include/Genotype.h
4ec5fe40d66539712b5c73ca34cfa0f6 *inst/include/PValues.h
464a9c9e83cb65bc7249e18cb38fc77a *inst/include/Phenotype.h
8c8419788e48fad5c0a5792234ebea85 *inst/include/Profiler.h
5e75e8196e50351504d0203b46d095ef *inst/include/SignificantFeaturesSearch.h
47d25de351d636cf16c23630ae0bcf0b *inst/include/SignificantFeaturesSearchTaroneCmh.h
dd9cdeea937475a814f27bb6caa3e31a *inst/include/SignificantFeaturesSearchWithCovariates.h
4b13ae9d41c794a9616abb4792870acd *inst/include/SignificantIntervalSearch.h
afc7a7cc0e240cbbf3b66bac30471a1a *inst/include/SignificantIntervalSearchChi.h
3c2871ff9f17f00a7dd3d93ecc9a29b2 *inst/include/SignificantIntervalSearchExact.h
fc8de52112fa41665750c37425a73da9 *inst/include/SignificantIntervalSearchFais.h
4c5010d4b3f986820613d9b02e1c5e2d *inst/include/SignificantIntervalSearchFastCmh.h
e9d9d13247c4f901e0b478ee20e22cdd *inst/include/SignificantItemsetSearch.h
66da116174b04d1d75fa6d4f25947297 *inst/include/SignificantItemsetSearchFacs.h
85086824a005f041086a6aa1bc696eac *inst/include/Summary.h
cebc7dc945a0add4fcbe5169b37f3c96 *inst/include/TransactionsData.h
0bc26c0b2ab9de7bcfabc56ad156eda3 *inst/include/chi2.h
0ec198f6d640a285738b7c58de93483e *inst/include/double_comp.h
9d9ed4b536fb23e5f83669b3be3a29ba *inst/include/gamma.h
d5c91d132d692616186d9f1a173f0b51 *inst/include/mem_rss.h
57b930aeffcc668d3592ccb5c6d4b7c6 *inst/include/pval.h
76c6fb7a481c9ea2d41cd191e30ba7a9 *inst/include/types.h
dbc0691a0060c740f1d537ac5d6e03f9 *man/CASMAP-class.Rd
d589fef660c6126f301d1dcfd8eea398 *man/CASMAPenv.Rd
3c0bbef33bd944de4d5b4d38d6bb00c5 *man/SignificantIntervalSearchChi-class.Rd
bd7599d244b8a1e2c835191ed9df481a *man/SignificantIntervalSearchExact-class.Rd
1a4245230db528a192bc02db0940b4ee *man/SignificantIntervalSearchFastCmh-class.Rd
10ed4227450a310b347d14c803c12824 *man/SignificantItemsetSearchFacs-class.Rd
59a535c2e357157b15c380960173ff36 *man/checkIsBoolean.Rd
e24635b16d7e3f6fc796329cc43d4256 *man/getExampleCovariatesFilename.Rd
6c0d674054655430376e4fc165102e2b *man/getExampleDataFilename.Rd
320aee6225ef88295ace25b1d7a331e1 *man/getExampleLabelsFilename.Rd
565c09e3d414d32ae811ce9ff321c3cd *man/getExampleSignificantRegionsFilename.Rd
8bd609f841787e2347f4b637fbd99252 *man/getHigherOrderEpistasisString.Rd
a517612606510343a8be904c98122d9b *man/getMinModeLength.Rd
ec7bb5737d918b67a6c05376b12db2a5 *man/getParentFunctionName.Rd
f8136f771a06d41f55b49b93325f89ec *man/getRegionGWASString.Rd
450eb8dc3c9fcc2b1dc3457cac4e7f4d *man/isHigherOrderEpistasisString.Rd
0c15cadb0d32025cb7fbd775c71c5e15 *man/isInOpenInterval.Rd
70559914603169e3e9bc29947c295504 *man/isRegionGWASString.Rd
a98c026c06963b846d56337926a1738d *man/lib_delete_search_chi.Rd
a443aae81567d4dd4c1031fcc4e431a9 *man/lib_delete_search_e.Rd
adc4311552ded4f7a09fdce5ad275e04 *man/lib_delete_search_facs.Rd
988a03d6b0b79de1ef5cf15bf78eb36d *man/lib_delete_search_fastcmh.Rd
20a4c7c0e4dd885785b11287b4ee59e2 *man/lib_execute_int.Rd
b66df17b940c6acd2a4258c759afdbb5 *man/lib_execute_iset.Rd
8f7595a3132a2cb6343ca53f191170b7 *man/lib_filter_intervals_write_to_file.Rd
3056935feb73bd61520672a2fe8024d7 *man/lib_get_filtered_intervals.Rd
02aad8da107013993dbc775413c9c570 *man/lib_get_result_facs.Rd
3890a8461aa8683a6ebbecb2a595ed9f *man/lib_get_result_fais.Rd
3994730686ddb7f4f95094252c81c5b8 *man/lib_get_result_int.Rd
c6ab3af15b0e13cab27fa5e17e7adfe8 *man/lib_get_result_iset.Rd
79865938e4f75f62f3c529ada333f82a *man/lib_get_significant_intervals.Rd
66bf179db4df1d988e7c694c25cbba9a *man/lib_get_significant_itemsets.Rd
a00df4c311be7f296d108a5d3db81d5a *man/lib_new_search_chi.Rd
e5a3e55823c289ccb1f6e1f725e46420 *man/lib_new_search_e.Rd
9b0673192bb80e7bd8819c655b80a624 *man/lib_new_search_facs.Rd
5914a1485d8d09b511f7c2670ef0dfd0 *man/lib_new_search_fastcmh.Rd
3604f09f507bb7938ff4478395e7ffd3 *man/lib_profiler_write_to_file.Rd
89a779de4d295b87ddc74ba4baee9c8e *man/lib_pvals_significant_ints_write_to_file.Rd
55816b7008531fc093856e2b20a84698 *man/lib_pvals_significant_isets_write_to_file.Rd
6fee6b8557002c78dbb96735bb473337 *man/lib_pvals_testable_ints_write_to_file.Rd
2efe7015e64d2daa0c5d2163393aa6d0 *man/lib_pvals_testable_isets_write_to_file.Rd
c84224d0c2e7f17dc233985be676d236 *man/lib_read_covariates_file_facs.Rd
98bcc7e890e567faeb0b80a00de401df *man/lib_read_covariates_file_fastcmh.Rd
08fd7ee40003393cff944e95cc56e981 *man/lib_read_eth_files.Rd
0fc1b5d4cd8dfbacfd8ecca0a93a8d38 *man/lib_read_eth_files_with_cov_facs.Rd
ca1babda0162a389d0de945a5e263504 *man/lib_read_eth_files_with_cov_fastcmh.Rd
5fcf999edcc4f5f6d7bceec171c32f9e *man/lib_read_plink_files.Rd
b09fd42e5d897dc74ead0f6ba1b29776 *man/lib_read_plink_files_with_cov_facs.Rd
456aada6cd40d82f097f6f676c32e0c1 *man/lib_read_plink_files_with_cov_fastcmh.Rd
21111706a7dc73108391e0d7aaa12b11 *man/lib_summary_write_to_file_facs.Rd
c9e0bffd09780104a76b88a413d282d5 *man/lib_summary_write_to_file_fais.Rd
5c3863d6f6b0a0a02c6b950f796b2dcc *man/lib_summary_write_to_file_fastcmh.Rd
1de0827396cbb128ba78a9597432ae7e *man/lib_write_eth_files_int.Rd
8f39dc27f40d87964f52dbea8c308848 *man/lib_write_eth_files_iset.Rd
313449144a5bfbb160873ea540d5f935 *man/lib_write_eth_files_with_cov_facs.Rd
bf5337555940e2cd5655e2e2f77c731b *man/lib_write_eth_files_with_cov_fastcmh.Rd
af2070ba8075ceb371cbfad14aa70b23 *man/m_SignificantFeaturesSearch-class.Rd
35985a548e86495df083821ad0cec3f3 *man/m_SignificantFeaturesSearchWithCovariates-class.Rd
663432ce6fd4a7cfa34dc216abcfd7d1 *man/m_SignificantIntervalSearch-class.Rd
8aef109198a6b292ef7c235fb269c4fc *man/m_SignificantIntervalSearchFais-class.Rd
7def36eeef007ca2775d8b2adbd07d08 *man/m_SignificantItemsetSearch-class.Rd
a5458422802ffd4fefc0bbced24de819 *man/modeErrorMessage.Rd
7b2a1b558bccb8cd7555140883238a8c *man/modeLengthErrorMessage.Rd
eac0c302e34acb909514306455b57d8e *man/modeNeedsMoreChars.Rd
c47253e84ff906ce766b69050b345752 *src/ArrayFile.cpp
adeb627e155a7107b0c5d85afc2a94b5 *src/CumulativeTimeMeasurement.cpp
4fcdb1e8d43e980f350e6a2be21dbacb *src/Exception.cpp
ce454346b81020890914978e400e6fc8 *src/FeatureSet.cpp
18ca1ce83a5d1f488977f9a101e3bd95 *src/FilterIntervals.cpp
60fd7577ffc35340153d7e5257b10a6f *src/Genotype.cpp
8b4aece8cec90ae139dee0891b3b087a *src/Makevars
9b2b1c7a2b8a2704929b286223bda2df *src/PValues.cpp
95b98c70b213642c577627844ec02b07 *src/Phenotype.cpp
d1842f4da8095cc32d587375b7834af2 *src/Profiler.cpp
02a9af03ffa7e119a03adbbcf9cb2c7d *src/RcppExports.cpp
7227efc2ef022dbce0515cdf387a5385 *src/SignificantFeaturesSearch.cpp
e3d1c6bbdc6d02fa23612a32ced7162a *src/SignificantFeaturesSearchTaroneCmh.cpp
b1e7a3e3669564649b6381b935293b4f *src/SignificantFeaturesSearchWithCovariates.cpp
3cbdc1a12badf42bd66b11c5105f3c3c *src/SignificantIntervalSearch.cpp
15e39782208c6c8314fa87981b0e9465 *src/SignificantIntervalSearchChi.cpp
5dd692b01f55c91bf473c93c2e1d0736 *src/SignificantIntervalSearchExact.cpp
724ea9131dc916d228cdb17dfe272f87 *src/SignificantIntervalSearchFais.cpp
ad8a4c37f9f3e93466f2f999fe93aa01 *src/SignificantIntervalSearchFastCmh.cpp
de08f7abe181e6ee4a29241061b2f10c *src/SignificantItemsetSearch.cpp
fe4372317cd8e4cf5e7fd5beb0e90ec4 *src/SignificantItemsetSearchFacs.cpp
ba10d5dbf65540b94feb2e998b78c1e6 *src/Summary.cpp
0c0093619e6b8a92b47157b675892328 *src/TransactionsData.cpp
61f9fe06973b5ad11c329f61d85a49f0 *src/double_comp.cpp
8e7667ad092beac7237ac6bda728cb9b *src/gamma.cpp
72d9e5f1c27a4ea33556a49b50f02af6 *src/pval.cpp
da94cf8645a9cfd26614ed239d592957 *src/sigpatsearch.cpp
fe33c55956fb34f9cd9f91b707d3975e *vignettes/intro.Rmd
