dda0f68c6bd3c5ee692e22366e290ab3 *DESCRIPTION
3b13ad44b48ca49aae707bbfd6238064 *NAMESPACE
200ceb3defd992c33a44e59bb918bdde *R/DEW.R
200030c69d958cb64ff32ca012925c18 *R/EOSregress.R
249372bdd45c140f2c7fd912dd935f65 *R/IAPWS95.R
c20a7e2861b636a095cf4b2eb078a07f *R/add.obigt.R
d44fec0d1aedd75adf19e5e7d3959b3e *R/add.protein.R
589b8562a276a110d2984fda99d1b12f *R/affinity.R
c0fc8061376ec42d04f68bbec5546a7a *R/basis.R
f4ed51013a898742af108c76783b28dd *R/berman.R
c790d9352d37e6354df182c17ea4a78e *R/buffer.R
eec6215cc7b6730fa0e6117c0b910f58 *R/cgl.R
1cbde38c1b03ee3e887fb354da17b016 *R/diagram.R
d95ab94816fe811d75e4eb90d4ee3b51 *R/eqdata.R
545c8b3032452b4349993164b67c1299 *R/equilibrate.R
a4d49b5ad6e82372fc8f24b6e9b2f5fe *R/examples.R
cd58b9d96333bc21d5f71e2080f0dd2b *R/findit.R
c6d87505862fdb4f2b8507c1a4088c37 *R/hkf.R
dfbda8a734c5dc8454e368c8af739711 *R/info.R
623ae7ebdddef126cb09786a39651a48 *R/ionize.aa.R
00df3f9525879c83e02f9e43bab17c8d *R/makeup.R
563ce438d860adcb54a2b8bd9a6a42a4 *R/mosaic.R
4f68ad64ca08045df38418afe8f9c2c6 *R/nonideal.R
42931896a16884af8e368153fabfba79 *R/objective.R
3e734d8b6041c50c7d642f0501824f87 *R/palply.R
48469b8e954de4bff3c67877698cfc9e *R/protein.info.R
e3b54e3772c5a2f9fb2919a10faed7a7 *R/revisit.R
3c639f43a44947615e5137a4346f5d31 *R/species.R
2575ce0271d142d63d1ca52382b03704 *R/subcrt.R
b6dd5bbac1490b8644d322c46b29a18a *R/swap.basis.R
6e392073671a29f86f4774453593bcd2 *R/taxonomy.R
875105b4b35ecd73a4e0f3086f44a486 *R/util.affinity.R
0c7817a28118065f4df3c2d0ebb4587d *R/util.args.R
13c33183b592075b0a6653efb3ece9bf *R/util.array.R
2b8c10e0dd65a5366b246e256a465ad4 *R/util.blast.R
42fdf68c654d75ba99e79e179784fad5 *R/util.character.R
1e5aa0e93e6910d536dd2d4e09b8ddeb *R/util.data.R
dd2b56c6a682ca771cfea55e18648394 *R/util.expression.R
7d6260684ec198a0fe659999c5bd042e *R/util.fasta.R
4064c9fe5772c41dd62d109450437953 *R/util.formula.R
e0b6550c4b952ccf07c503618935637a *R/util.list.R
ee153095f8e8f09d21d9565b5df49b3c *R/util.matrix.R
f33f9c0a05a56a8bb457930a5fd8904f *R/util.misc.R
29e0ca8f3965d22d877d04c6e260282f *R/util.plot.R
aafa0837fbb97de4d9a0f097273b5523 *R/util.protein.R
77b5233b108f73268f8bffbcb50c6200 *R/util.seq.R
d386347bf4176b30f0d940d10016283a *R/util.test.R
9586a4b6a83dadea895ba097b998f4b3 *R/util.units.R
9a16f13f9095d5e813b84a64327de1ea *R/util.water.R
ab60cc511bdf0eef8d900d6d0c5752b8 *R/water.R
b975acb5b40ac23ee7020da827cd468d *R/wjd.R
11b2eb66a5b699a15c837884cc3141ff *R/yeast.R
c319cade8ae81732eb8d2d93069da474 *R/zzz.R
769a69f26356b8ecf9c4526101f637b7 *build/vignette.rds
9aa7fce03bc7418254fdfc4d3ec338ff *data/OBIGT.R
973da12ce4b2089de256200ce5891d34 *data/buffer.csv
86ca012b8fedf9f6d651b4c9b3f4eec5 *data/element.csv
a535379d10d754a0faefe7db387cc716 *data/groups.csv
556f50b332e0316c1334dcd1419e97b3 *data/opt.csv
c9324a38239751e0488dac737b84df42 *data/protein.csv
6b353f48184fb02d989744e35cd2f973 *data/refs.csv
6d1b38c44b9f43d207a38df3901f49d2 *data/thermo.R
7391e78d4e277810e7a7217ee9617067 *demo/00Index
32d47cade6c8ab680393bfb949cfecc3 *demo/DEW.R
7490d3dd6077be757c6e247fc584d26b *demo/NaCl.R
0379b5ab1059a28cac03c7d97767e6c8 *demo/ORP.R
87b044b5ff4dc712151616be32d749fd *demo/Shh.R
cf82f096ab15c0e153fae859fdc321ff *demo/TCA.R
82a221128ebd79b05e040103d4b28ad0 *demo/activity_ratios.R
e3687fc71dd3abfbb20abf23511d6427 *demo/adenine.R
a2464df050438357d0f2f92b4073c9ee *demo/affinity.R
bb017f98c4e2c471141ba3bf2b54f3cf *demo/buffer.R
efe6be00b12597bb5675b83c15f767eb *demo/bugstab.R
91ea0d3534e5ffceb3702862e3900e96 *demo/carboxylase.R
4b51b1e1d40d26218ecaac945bf13a1e *demo/copper.R
557b8ac9d7382411fdf11b99c5ae2ca6 *demo/dehydration.R
3444d512eed1beb87cfd651e05c3a389 *demo/density.R
520df3dd3e6a4e25568c32f274557954 *demo/findit.R
a808c1a2161d83ad7543da0fd83e1ba8 *demo/go-IU.R
5aed5d7470f748d97252b613cf40ad77 *demo/ionize.R
7dfa650011a72b0e7052a47b8ee71a56 *demo/lambda.R
b4abe77ce4e72eb2b8e9a5ab8182f07a *demo/mosaic.R
2b1af2525b9ea5b837bb4a82e9430018 *demo/protbuff.R
9a4f9d904c26d8618b0914fcbdb4231c *demo/protein.equil.R
8a947320609b98a7e88cd6ff9fa03f74 *demo/revisit.R
75c457fa7efaa0f5a030f440bc421687 *demo/solubility.R
0c625fbbc7443e52e9ab0ca913313f56 *demo/sources.R
4d8ff94cadf1b6177624d5ef37fd6b8d *demo/wjd.R
377b875e00d3d9f38e9cb9e6ab241e3f *demo/yeastgfp.R
52a8b9635b3dae610c0643e70ee4ac0d *inst/CHECKLIST
e09cafb05d854f1d113f44ca9dd25d01 *inst/CITATION
2f8e0d9f554a0b1dfd40170fc5b31869 *inst/NEWS
5ced5be06324bc3d1c8987ebfa649a14 *inst/ONEWS
de50b7d1c7afe5684917e4f3c1a796f9 *inst/doc/anintro.R
83d5886d8ac0dfc6b7cb9be8922e0f7e *inst/doc/anintro.Rmd
e6b6c7ed4e4f051fa66111248b7a91b6 *inst/doc/anintro.html
681cd82ce67afbf45d092c846ebd8c2d *inst/doc/eos-regress.R
4920e6dcbb72162a62ae1b1c68cbf63f *inst/doc/eos-regress.Rmd
767b566ef2e888e68b800c1a694a6f10 *inst/doc/eos-regress.html
d14a2274dd0df643d73c18b8e732324a *inst/doc/equilibrium.R
2fb22d3d05ea10c1b98f49ae9472a9c6 *inst/doc/equilibrium.Rnw
c3cfe47786546278edfbd86d3024a376 *inst/doc/equilibrium.pdf
9684bdcf3281d7fc23c3f02dc37b776c *inst/doc/hotspring.R
3fcda50906de386bafdbd7a5410eb7a5 *inst/doc/hotspring.Rnw
8aa84acdfea03a2a95c81ccbd621318d *inst/doc/hotspring.pdf
0e999c1aafb364005409178e52301b42 *inst/doc/obigt.R
a8880e9f2c31b6409175dd164e29b406 *inst/doc/obigt.Rmd
a0f554b1a18596301e23a933fda139c9 *inst/doc/obigt.html
6f67524735d573a0b4107c44aeac0dc4 *inst/doc/wjd.R
08ab511fc6dcb1f9563e9f086f82ba97 *inst/doc/wjd.Rnw
3960e49fc7d5d4924c46cdeaf4838055 *inst/doc/wjd.pdf
32c87c56c63c0ad85cd5e81170ffe03c *inst/extdata/Berman/BDat17.csv
08b2f48963dbc9fae25ac1dbca5199df *inst/extdata/Berman/Ber88.csv
1fc0ac228942ed4099b54051b00e07e0 *inst/extdata/Berman/Ber90.csv
e964eddcc3c0b12757d3644e5c450628 *inst/extdata/Berman/DS10.csv
9ea4be31df8134c0800fc8830c1d5a17 *inst/extdata/Berman/FDM+14.csv
995a80aa0e104669ea9b6fd03c60f634 *inst/extdata/Berman/JUN92.csv
10351adf5a8c6fcbeb5ba1a6c83dba4d *inst/extdata/Berman/SHD91.csv
3e5669ae46f790d44e45508451732876 *inst/extdata/Berman/ZS92.csv
65b976f4a38d7df000a1e32c9b50be6e *inst/extdata/OBIGT/Berman_cr.csv.xz
3fc4b5d18e03dc8e2f8aba88da3e4e32 *inst/extdata/OBIGT/DEW_aq.csv
209d413c0a8e4e48d2539308aafd3d17 *inst/extdata/OBIGT/H2O_aq.csv.xz
8dec38b056cb1084ffa40ff8b7f0275b *inst/extdata/OBIGT/SUPCRTBL.csv
21bf5a0f3aff6a9e0e98ba6abf2b4a1b *inst/extdata/OBIGT/biotic_aq.csv.xz
e1f525808ea9477aa155dc15e1ffc009 *inst/extdata/OBIGT/inorganic_aq.csv.xz
6c1056562796e660b1a1282243cd8475 *inst/extdata/OBIGT/inorganic_cr.csv.xz
44b886df141f95ea870a76b51382183a *inst/extdata/OBIGT/inorganic_gas.csv.xz
7e5db90071bb048b55932eeac951f853 *inst/extdata/OBIGT/organic_aq.csv.xz
309ace76f574dc4475fca46d14aa36e8 *inst/extdata/OBIGT/organic_cr.csv.xz
6f033d38d5c61f323f49c22b34d43bb2 *inst/extdata/OBIGT/organic_gas.csv.xz
838d7fcc00184b140a44fb67b0989abb *inst/extdata/OBIGT/organic_liq.csv.xz
1426174f0b2ad3d0213afd5825882043 *inst/extdata/abundance/TBD+05.csv
8529275f74aaf3e29d9ecd580018243a *inst/extdata/abundance/microbes.csv
8d8775b82acd74787b42d20cb7c57dbc *inst/extdata/abundance/yeastgfp.csv.xz
6338d402ba84a54e8bb9b92e6c6c25dc *inst/extdata/bison/bisonN_vs_refseq57.blastp.xz
7228d75f6856d9fa3e89a2c5d62cb409 *inst/extdata/bison/bisonP_vs_refseq57.blastp.xz
f4ef3b5140a27077e7a2375cbcc96cb2 *inst/extdata/bison/bisonQ_vs_refseq57.blastp.xz
22a1c0ae59d9a2c23a72352351416cc6 *inst/extdata/bison/bisonR_vs_refseq57.blastp.xz
e2454520694916630af29ad0e0691b9d *inst/extdata/bison/bisonS_vs_refseq57.blastp.xz
d4559af19780f039d327b46f9cf8762e *inst/extdata/bison/gi.taxid.txt.xz
a086970a75c649d9d9a06d3b7b1d5c78 *inst/extdata/cpetc/Cp.CH4.HW97.csv
4c061e65c269d71259e76af2f6649b59 *inst/extdata/cpetc/PM90.csv
d4c28a9c1a480997e666942bc0ce78f4 *inst/extdata/cpetc/RH95.csv
63a3eb117e18f115567146bc1333840e *inst/extdata/cpetc/RT71.csv
cb548eb2bfaf8bb502265a78a06ed938 *inst/extdata/cpetc/SC10_Rainbow.csv
2cf4e008e69a14bc68b74176f85fcd22 *inst/extdata/cpetc/SOJSH.csv
c80a736c876fbd34ad72fdef4391f618 *inst/extdata/cpetc/SS98_Fig5a.csv
792e76183b7310209d8e41b51884422f *inst/extdata/cpetc/SS98_Fig5b.csv
625fbccc4a8cafb0c5f9a3c3838e170a *inst/extdata/cpetc/V.CH4.HWM96.csv
5554c55eb015cc40e6dd4f83b9555574 *inst/extdata/cpetc/bluered.txt
db01fed4a8e9461ad3537a6ca8508d07 *inst/extdata/cpetc/rubisco.csv
12235e8510491942570ec98d899cdd62 *inst/extdata/fasta/EF-Tu.aln
6c083a7c526aa69ab22f02d393562d59 *inst/extdata/fasta/rubisco.fasta
c47fae9ec19d0e03c53b3b3d9c675f3c *inst/extdata/protein/DS11.csv
2d3c30198d41c41014137de185fddaa8 *inst/extdata/protein/DS13.csv
ce7775b90a578c88d8afd1234e02f033 *inst/extdata/protein/Sce.csv.xz
c1dc7668f53eb707a814d243f00c2f5c *inst/extdata/protein/microbial.aa.csv
cc22cbcf359acd7dc141a6c20ba62b7d *inst/extdata/refseq/README.txt
dfb1169d771f24e7f0518f8ec0b1f47f *inst/extdata/refseq/gencat.sh
b08ccc1878a3b23b2b71d2a3368f9281 *inst/extdata/refseq/mkfaa.sh
5f9583b243ab3f8cb8dc8c6feffb368d *inst/extdata/refseq/protein.refseq.R
a29aed66693cc633b2b99e9653fc52b4 *inst/extdata/refseq/protein_refseq.csv.xz
6630c01f8dd2734ac230dc952006ff7d *inst/extdata/refseq/taxid.names.R
cb5c1104cc112e36ee013a1ca758ef3c *inst/extdata/refseq/taxid_names.csv.xz
be62f57b4d522d65f6965f7e6464b05f *inst/extdata/refseq/trim_refseq.R
6b5df04d4bbd195762f29a6bb6fa2821 *inst/extdata/supcrt/compare.R
8990191257d9aba3fa3bdda0d8178572 *inst/extdata/supcrt/newnames.csv
138ee50a19160c0a3e46b017ee75b1fe *inst/extdata/supcrt/read.supcrt.R
468702289d85cb1752c6b4a33439203a *inst/extdata/taxonomy/names.dmp
ea77d9fdce6963298ac60cbda4734dd1 *inst/extdata/taxonomy/nodes.dmp
2ac4a291a6d6428fcb34dafb5ee06a80 *inst/extdata/thermo/BZA10.csv
09a3a63a4392c184aeaf64b109aea9d1 *inst/extdata/thermo/DLEN67.csv
3fd03388f781c84e2411dc5bfe124a57 *inst/extdata/thermo/RH98_Table15.csv
05dbe842258a71fe2dfa44a8131c9397 *inst/extdata/thermo/obigt_check.csv
336e3c620f3cf6067e94188b6f9251ce *man/CHNOSZ-package.Rd
d57acd44b0629d3357eed028f73f3cd2 *man/DEW.Rd
3d802e24dd20d347ec29b6264cbebab2 *man/EOSregress.Rd
c681695da64eceb19b3101f9e01fb39c *man/IAPWS95.Rd
27a2dd0ba9c329be943af5f1a19cd10f *man/add.obigt.Rd
b04d468beb364d14b577931c460a22ce *man/add.protein.Rd
92554178438d56803432fa7d01ba5ae0 *man/affinity.Rd
c99d4c77875b753a9c3dfc0356f9bbab *man/basis.Rd
b5f688e86f368538aa0649284f804c0b *man/berman.Rd
b9e4f404883c0b6fdd19e651080ad559 *man/buffer.Rd
881f3d15da1595befe04ec0a5c72cd60 *man/data.Rd
e053ecfa16ac2ef3212ff98170deeb2d *man/diagram.Rd
0326244e8636faa263735cbfb0543cde *man/eos.Rd
04bd63d3930a4c1f14f5276dd2381d12 *man/eqdata.Rd
6e6a076e6d6e0995bdd1d9e14d2c209c *man/equilibrate.Rd
7058a20a0a62d0a8a94765a94822b9ce *man/examples.Rd
3a36df8cff494dfe1dd13f038a9923d9 *man/extdata.Rd
5ace19560c3863979dba04377e7250c3 *man/findit.Rd
1aa915264d2c4ceed72ef8c423265927 *man/info.Rd
77afe13b2119f631caf704a82ac7c9a4 *man/ionize.aa.Rd
3a898c645601fd093edf23412779dceb *man/macros/macros.Rd
0fd9bc543f5741f60d9a2c285f14bb05 *man/makeup.Rd
b629af899be912019dcdaaa11fff56c6 *man/mosaic.Rd
fe338b7818ca438947229b540e6c24f0 *man/nonideal.Rd
ab8f50921463ea0b289b93d22076b569 *man/objective.Rd
ae6025d3eb3231bc17f506ae474e82ac *man/palply.Rd
b40bbc153ab18df902ceb7fa2e493150 *man/protein.Rd
638ea016f1e966a0b2cc4a19b53df761 *man/protein.info.Rd
cbb69e0d65dce1fc8bb25f345f88af56 *man/revisit.Rd
6e9c706655b4f04652d5359f90764b1a *man/species.Rd
cf4bcb29ee96f477d67cbe3ee579a48f *man/subcrt.Rd
e714ab002e59bc527697206e6777b6e6 *man/swap.basis.Rd
1ccac40554c35c4e595c50a6dba587d6 *man/taxonomy.Rd
0fc17dc2236107e2b3c9bca11ae49e07 *man/util.array.Rd
f7832f1cb0e60716a48756ecc01a67a5 *man/util.blast.Rd
8a738835a78756e5b38920a5c8905ec3 *man/util.data.Rd
1ba7e4845708fe1aaedceccc30d53e85 *man/util.expression.Rd
2f96937c4320045de185072a87180d43 *man/util.fasta.Rd
3a153f5b0ab2f7b0bf6cee6312b88149 *man/util.formula.Rd
c842d89537d72eae0334565ad9fb362a *man/util.list.Rd
aba54283418c4e9281325cccb2540b5d *man/util.matrix.Rd
70e17ad8925bb36eb2ea20178f1caf25 *man/util.misc.Rd
dbe147870e51f87cbb216c1ab0462b64 *man/util.plot.Rd
1dd662125fdd757f20f11fcb23960f51 *man/util.protein.Rd
c7d1c1b206d01f4fe3328e0728d2b7af *man/util.seq.Rd
0acf7f0423dd646c6371d7e47bb325d5 *man/util.test.Rd
44b0fe81eae1062ca233219c1466f052 *man/util.units.Rd
349a99c05e5213e7062055053a0581ae *man/util.water.Rd
9be0bd42aac1271b01b54119f44094bc *man/water.Rd
78745ca6221c3ab76c2e022243d471a5 *man/wjd.Rd
79b720d53b0817e6730818a27d69127f *man/yeast.Rd
ce8dddd6c0f946c06d1941fa8cc08385 *src/H2O92D.f
ac330feb5740dc05c18276a2bec150b2 *src/init.c
bc663c4079454316fda87081548878aa *tests/testthat.R
bf0814c50a0a324295bdf578b1460ba7 *tests/testthat/test-DEW.R
c034d09b125dc9ac938eb80d0f521acf *tests/testthat/test-EOSregress.R
f506a0a65f7a0b703ce58af58d5663ab *tests/testthat/test-IAPWS95.R
98e15becd3a4dcb2d51fe30af7da72f7 *tests/testthat/test-add.protein.R
fb1861c8e7de0c273e996c56b6b8524f *tests/testthat/test-affinity.R
dfee55fa20cd8c399d4876137289c518 *tests/testthat/test-basis.R
3dda5eebfbf2f97912b0e6baa1294964 *tests/testthat/test-berman.R
27ce39464c04a5800209cf89741f164f *tests/testthat/test-diagram.R
8e02a369516aa603510d9c3145ef64b4 *tests/testthat/test-eos.R
6d3624937505476c30074b2d06ee832d *tests/testthat/test-equilibrate.R
a3a4256d85f53eea84d0c6ff3bb0ad2a *tests/testthat/test-findit.R
b79275479eceb833185ca469102d5bb1 *tests/testthat/test-info.R
52fa80df0da12807dcba28491222e3cc *tests/testthat/test-ionize.aa.R
0b3744c48afe6d39d1e920b21246e54e *tests/testthat/test-ionize.aa_pK.R
d0a1b9436267fbc68e2abb325186c44c *tests/testthat/test-logmolality.R
04118ae80c98c65820a3f8c31be81c36 *tests/testthat/test-makeup.R
5f80db58a0579819bc03ac6a742defbd *tests/testthat/test-mosaic.R
cf773122036d0cf1fb6c5ee7bf2a84e9 *tests/testthat/test-nonideal.R
c1140f5aebdb1463d285a85d6ff21492 *tests/testthat/test-protein.info.R
cacd5db045fe7bdc031c31fd059c9321 *tests/testthat/test-revisit.R
4969e64e202c35544523da178e1570bc *tests/testthat/test-species.R
e7d4d68396abe430605430cb9537c83c *tests/testthat/test-subcrt.R
c98a0471a3620d2b2d908c667b34aea2 *tests/testthat/test-swap.basis.R
8bb5256ec7dd01e9806e8a68b0ed7cb3 *tests/testthat/test-thermo.R
5deabbad81d6b3a3e799bda08bc83499 *tests/testthat/test-util.R
f2614a4212cfaae2d89bac87f198c801 *tests/testthat/test-util.affinity.R
68330dc05bb99efbf0d12bdbb3c35544 *tests/testthat/test-util.data.R
a461c841015bd29e5b7e8282fd7d7aa5 *tests/testthat/test-util.list.R
8613685432e22a3bfc273b38fecf8039 *tests/testthat/test-util.program.R
989f65efb92de21f05687473740f0f88 *tests/testthat/test-util.seq.R
98c75bf4ff715f5e424470f9e0bbd6b7 *tests/testthat/test-water.R
4eb6410b3ca126697c6dac1b27fef3e4 *tests/testthat/test-water.lines.R
a7cd1cc4f31ee00e7a05019ec991d5cf *tests/testthat/test-wjd.R
0a1ab9ed5dd71c56aec75ae2543f3b29 *tests/testthat/test-yeast.aa.R
9dd748660176c84e3fc7c794ceabc781 *tests/testthat/test-yeastgfp.R
0a4a1c7ed34e2488a8d80e2a159a7678 *vignettes/CHNOSZ.dia
ec7b028fbda15f853610b2670efd61ed *vignettes/CHNOSZ.png
83d5886d8ac0dfc6b7cb9be8922e0f7e *vignettes/anintro.Rmd
1435856e88a3d878a6c67c583acff55b *vignettes/dayhoff.pdf
ff5bbe9a85a26d8a5bd20e845496341d *vignettes/elementa.csl
4920e6dcbb72162a62ae1b1c68cbf63f *vignettes/eos-regress.Rmd
2fb22d3d05ea10c1b98f49ae9472a9c6 *vignettes/equilibrium.Rnw
8053a125c307e3ba3cf9b53eb1c25c73 *vignettes/equilibrium.lyx
3fcda50906de386bafdbd7a5410eb7a5 *vignettes/hotspring.Rnw
10972fd9a200a165729f8508d4ebbee5 *vignettes/hotspring.lyx
a8880e9f2c31b6409175dd164e29b406 *vignettes/obigt.Rmd
4cad5a3d54ca15abee492d463180afb2 *vignettes/obigt.bib
7cd2be3bdd18cde9af87c57f1782e7bd *vignettes/obigt.css
e12e916e107c1ab6071dbcb700d822a5 *vignettes/rubisco.svg
e2d2491428d78914d2dd6053b2e18181 *vignettes/vig.bib
cd06f0037c2621d1bffb33b95f47e717 *vignettes/vig.css
08ab511fc6dcb1f9563e9f086f82ba97 *vignettes/wjd.Rnw
c404221f1e48aa41f34e4990f77549ff *vignettes/wjd.lyx
