13fc550c49765766dc777388cb3a6571 *DESCRIPTION
de1bd990f89f83d18fff83b84ab39dc5 *LICENSE
cce745791c0634537b4898499da808d5 *NAMESPACE
b67b7c101ea66e4f7cc6129ced2e0fe1 *R/GPrank-package.R
e54ce84db0d439eb53b3747d69209aa1 *R/RNAseqDATA-data.R
42e4c08e646677bd802fdeac026c7f39 *R/apply_gpTest.R
6c1b2d1a79451658c2a3ded0a0869d0c *R/bbgp_snpData.R
6e22a99f8329d21437bf0c04bdbe3732 *R/bitseq_fitGPs.R
cdabc5cdb348e191d1b4f35ae1237e20 *R/bitseq_plotGP.R
c392bb9495e18f74125d321e49e16b82 *R/bitseq_rnaSeqData.R
c50b622d29469249caad3f895a1dfc2c *R/bitseq_setPlot.R
54cb68a1fc96241acddc9aa24ed7b65a *R/constructModel.R
f4eef5033ee1dbae850fcd8e4c7f1ab1 *R/createDatabase.R
7793d10903b9a11e7c425c96ff71ae74 *R/fixedvarianceKernCompute.R
ad896616cd3915236fe812be840ec019 *R/fixedvarianceKernDiagCompute.R
2026c8fe3bdd357a67ffa96ae3d1d3cf *R/fixedvarianceKernExpandParam.R
e50de00a94e269d546240f83e5f1db61 *R/fixedvarianceKernExtractParam.R
f177a32b951cefb50756260ddb9869ba *R/fixedvarianceKernGradient.R
bca3c22acc58b832d284e9ca4963a8f0 *R/fixedvarianceKernParamInit.R
f73ea9092fb8b96b87fbb164211be127 *R/getColorVector.R
808b8b3ec7e80141d91e8ff8f4e6eee7 *R/getModelKernParams.R
a19e886a4d0c24e774369dec22f2813f *R/getYlimits.R
b39875cd648cf4ba7ddd1c7e019aaf8f *R/get_bbgpMeanStd.R
46cacfac67ddcc2e44346da97796ce75 *R/plotGP.R
1887aa4979b4ff072e70d91bb8c6786f *R/setInitParams.R
a345edbfd79a31de790480fe675e8893 *R/snpData-data.R
fe99d3431c48c2042bcc9333dd631e2d *build/vignette.rds
8ba7ea9db86e1c47347d8fa5dfca3ad8 *data/RNAseqDATA.RData
d4b54546f90581c55c4f1533f188d903 *data/snpData.RData
1b31a719d37af800ce5c57d57f2fe948 *inst/CITATION
7d50d1d59c02bf22fd942dfd54d4fe02 *inst/doc/vignette.R
f885e1a57e512af73ae5551f14248d71 *inst/doc/vignette.Rnw
2cb216ae87d886c19e5f5be8b30d6f3c *inst/doc/vignette.pdf
7a736b0bb2cdf5bb26d45eb027cfb958 *man/GPrank-package.Rd
db27ab332d82c4449b36bbf56496a21c *man/RNAseqDATA.Rd
7696a0f470c22d98eedaac4c460c4403 *man/apply_gpTest.Rd
b61017e848ebf8801afe121a370918a3 *man/bbgp_snpData.Rd
0a6c2fbf46c9befe8a24b45c367c1671 *man/bitseq_fitGPs.Rd
6f18bc8d3424ba5a1b2333482ffdb99e *man/bitseq_plotGP.Rd
4d021021c0d92a1d5c090f0d3f85e714 *man/bitseq_rnaSeqData.Rd
1625ebfb97288a64ea29c40ebe3b45c7 *man/bitseq_setPlot.Rd
339de0a30453f4a325131f32c4bf67fd *man/constructModel.Rd
11c5c5c1800f07379e7112f14239a801 *man/createDatabase.Rd
f0258e8bbdccdc0cb3dc9a14a8af44b7 *man/fixedvarianceKernCompute.Rd
b5e983b6a2e9185905f0f16e12e804f5 *man/fixedvarianceKernDiagCompute.Rd
48e0baaf11cd37e7f07e627f85396dc0 *man/fixedvarianceKernExpandParam.Rd
d9aca4068191c35da95b5483bb853fd3 *man/fixedvarianceKernExtractParam.Rd
8173dd8c6f99db7c7437fe77dc28688e *man/fixedvarianceKernGradient.Rd
3cb356faedc06b0340212a2c8089a209 *man/fixedvarianceKernParamInit.Rd
0b68816c298bb1613fd0c552795cc5a4 *man/getColorVector.Rd
f73bf55174a72ac05cece50a00a368c4 *man/getModelKernParams.Rd
e5f2024327bb888e58f5240355a3a7ca *man/getYlimits.Rd
c8df33dc6014c06ce799acd55b1bb258 *man/get_bbgpMeanStd.Rd
26439e6843ef894760b980b66f7474d0 *man/plotGP.Rd
59ade825af570df908d4933219d577fd *man/setInitParams.Rd
d6daef7a4fb9ebbc2f34ecd159c7b55f *man/snpData.Rd
1287a86a63c6f15b41de2a75d76583a9 *vignettes/GPrank_refs.bib
5af2310e1183326990a9175d89075709 *vignettes/example_tr
42a172354866f5420af502c479f6d88c *vignettes/figures/geneA_GP.png
e989a1925c814080463d06e71704d5dd *vignettes/figures/geneB_GP.png
2f45aa0aac55755f4a802578c5cd3d8c *vignettes/natbib.bst
e8af73603d5c055d67faa3405f72c6f0 *vignettes/natbib.sty
142a19b41837104069a3ad1c2d14cf7c *vignettes/sampleCountsData
51985867f6bead1865bb21fa34ff32b2 *vignettes/t0000.rpkm
8e82d3833d0708edc219c1bbb3c80ecc *vignettes/t0005.rpkm
2771d2bc66d9fd2e30122566b8b06634 *vignettes/t0010.rpkm
34fbe87c4b2dc0648100e7629196f281 *vignettes/t0020.rpkm
fa9cce292d869ce382939c4f06c7eb5a *vignettes/t0040.rpkm
43da6efd57dfb77497029ebbf69b0475 *vignettes/t0080.rpkm
e2471caba93ffadba3e1c39bf0ec78cc *vignettes/t0160.rpkm
634a844538826d9f62a029c303a23a48 *vignettes/t0320.rpkm
7eb01091935fdc0cf758060c045803d6 *vignettes/t0640.rpkm
b0f3280d4d01a32b9a652d87f6cc650a *vignettes/t1280.rpkm
f885e1a57e512af73ae5551f14248d71 *vignettes/vignette.Rnw
