# Generated by roxygen2: do not edit by hand

S3method("$<-",Align)
S3method("+",alignpatches)
S3method("[",align_area)
S3method(align_add,Coord)
S3method(align_add,default)
S3method(align_setup_data,"function")
S3method(align_setup_data,character)
S3method(align_setup_data,data.frame)
S3method(align_setup_data,matrix)
S3method(align_setup_data,numeric)
S3method(alignpatch,"NULL")
S3method(alignpatch,"function")
S3method(alignpatch,Heatmap)
S3method(alignpatch,HeatmapAnnotation)
S3method(alignpatch,HeatmapList)
S3method(alignpatch,Layout)
S3method(alignpatch,alignpatches)
S3method(alignpatch,default)
S3method(alignpatch,formula)
S3method(alignpatch,free_align)
S3method(alignpatch,free_border)
S3method(alignpatch,free_guide)
S3method(alignpatch,free_lab)
S3method(alignpatch,free_plot)
S3method(alignpatch,free_space)
S3method(alignpatch,free_vp)
S3method(alignpatch,gList)
S3method(alignpatch,ggplot)
S3method(alignpatch,grob)
S3method(alignpatch,patch)
S3method(alignpatch,patchwork)
S3method(alignpatch,pheatmap)
S3method(alignpatch,recordedplot)
S3method(alignpatch,spacer)
S3method(alignpatch,trellis)
S3method(alignpatch,wrapped_patch)
S3method(alignpatch,wrapped_plot)
S3method(alignpatches_add,layout_annotation)
S3method(alignpatches_add,layout_design)
S3method(alignpatches_add,layout_title)
S3method(alignpatches_add,plot_annotation)
S3method(alignpatches_add,plot_layout)
S3method(as_areas,"NULL")
S3method(as_areas,align_area)
S3method(as_areas,character)
S3method(as_areas,default)
S3method(as_areas,patch_area)
S3method(c,align_area)
S3method(free_align,alignpatches)
S3method(free_align,default)
S3method(free_align,free_align)
S3method(free_align,free_border)
S3method(free_align,free_lab)
S3method(free_align,ggplot)
S3method(free_border,alignpatches)
S3method(free_border,default)
S3method(free_border,free_align)
S3method(free_border,free_border)
S3method(free_border,free_lab)
S3method(free_border,ggplot)
S3method(free_guide,alignpatches)
S3method(free_guide,free_guide)
S3method(free_guide,ggplot)
S3method(free_lab,alignpatches)
S3method(free_lab,default)
S3method(free_lab,free_align)
S3method(free_lab,free_borders)
S3method(free_lab,free_lab)
S3method(free_lab,free_space)
S3method(free_lab,ggplot)
S3method(free_space,alignpatches)
S3method(free_space,default)
S3method(free_space,free_space)
S3method(free_space,ggplot)
S3method(free_vp,alignpatches)
S3method(free_vp,default)
S3method(free_vp,ggplot)
S3method(get_context,Layout)
S3method(get_layout,HeatmapLayout)
S3method(get_layout,StackLayout)
S3method(ggalign_build,HeatmapLayout)
S3method(ggalign_build,StackLayout)
S3method(ggalign_build,alignpatches)
S3method(ggalign_build,ggplot)
S3method(ggalign_gtable,alignpatches)
S3method(ggalign_gtable,ggplot)
S3method(ggalign_stat,Align)
S3method(ggalign_stat,HeatmapLayout)
S3method(ggalign_stat,StackLayout)
S3method(ggplot_add,coord_ggalign)
S3method(ggplot_add,facet_ggalign)
S3method(ggplot_add,patch_inset)
S3method(ggplot_add,patch_labels)
S3method(ggplot_build,ggalign_heatmap)
S3method(grid.draw,Layout)
S3method(grid.draw,alignpatches)
S3method(grid.draw,patch_ggplot)
S3method(heatmap_add,Coord)
S3method(heatmap_add,default)
S3method(heatmap_add,layout_annotation)
S3method(heatmap_layout,"NULL")
S3method(heatmap_layout,default)
S3method(heatmap_layout,formula)
S3method(heatmap_layout,functon)
S3method(heatmap_layout,matrix)
S3method(layout_add,HeatmapLayout)
S3method(layout_add,StackLayout)
S3method(layout_and_add,HeatmapLayout)
S3method(layout_and_add,StackLayout)
S3method(layout_heatmap_add,Align)
S3method(layout_heatmap_add,data.frame)
S3method(layout_heatmap_add,default)
S3method(layout_heatmap_add,ggplot)
S3method(layout_heatmap_add,heatmap_active)
S3method(layout_heatmap_add,list)
S3method(layout_heatmap_add,matrix)
S3method(layout_heatmap_and_add,default)
S3method(layout_heatmap_and_add,ggplot)
S3method(layout_heatmap_subtract,default)
S3method(layout_heatmap_subtract,ggplot)
S3method(layout_stack_add,Align)
S3method(layout_stack_add,HeatmapLayout)
S3method(layout_stack_add,default)
S3method(layout_stack_add,ggplot)
S3method(layout_stack_add,heatmap_active)
S3method(layout_stack_add,layout_annotation)
S3method(layout_stack_add,list)
S3method(layout_stack_add,stack_active)
S3method(layout_stack_and_add,default)
S3method(layout_stack_and_add,ggplot)
S3method(layout_stack_subtract,default)
S3method(layout_stack_subtract,ggplot)
S3method(layout_subtract,HeatmapLayout)
S3method(layout_subtract,StackLayout)
S3method(length,align_area)
S3method(make_wrap,alignpatches)
S3method(make_wrap,ggplot)
S3method(make_wrap,wrapped_plot)
S3method(order2,dendrogram)
S3method(order2,hclust)
S3method(order2,ser_permutation)
S3method(order2,ser_permutation_vector)
S3method(patch,"function")
S3method(patch,Heatmap)
S3method(patch,HeatmapAnnotation)
S3method(patch,HeatmapList)
S3method(patch,alignpatches)
S3method(patch,default)
S3method(patch,formula)
S3method(patch,gList)
S3method(patch,ggplot)
S3method(patch,grob)
S3method(patch,patch)
S3method(patch,patch_ggplot)
S3method(patch,patchwork)
S3method(patch,pheatmap)
S3method(patch,recordedplot)
S3method(patch,trellis)
S3method(plot,Align)
S3method(plot,align_area)
S3method(print,Layout)
S3method(print,align_area)
S3method(print,alignpatches)
S3method(print,patch_ggplot)
S3method(set_context,HeatmapLayout)
S3method(set_context,StackLayout)
S3method(set_layout,HeatmapLayout)
S3method(set_layout,StackLayout)
S3method(stack_layout,"NULL")
S3method(stack_layout,character)
S3method(stack_layout,data.frame)
S3method(stack_layout,default)
S3method(stack_layout,matrix)
S3method(stack_layout,numeric)
export(Align)
export(align)
export(align_dendro)
export(align_gg)
export(align_group)
export(align_kmeans)
export(align_order)
export(align_panel)
export(align_plots)
export(align_reorder)
export(alignpatch)
export(area)
export(dendrogram_data)
export(free_align)
export(free_border)
export(free_guide)
export(free_lab)
export(free_space)
export(free_vp)
export(ggalign)
export(ggalignGrob)
export(ggalign_stat)
export(ggheatmap)
export(ggpanel)
export(ggstack)
export(gpar)
export(hclust2)
export(heatmap_layout)
export(hmanno)
export(inset)
export(is_ggheatmap)
export(is_ggstack)
export(layout_annotation)
export(layout_design)
export(layout_title)
export(order2)
export(patch)
export(patch_titles)
export(read_example)
export(stack_active)
export(stack_layout)
export(theme_ggalign)
export(unit)
export(wrap)
exportMethods("$")
exportMethods("&")
exportMethods("+")
exportMethods("-")
exportMethods(show)
importFrom(data.table,":=")
importFrom(data.table,.BY)
importFrom(data.table,.EACHI)
importFrom(data.table,.GRP)
importFrom(data.table,.I)
importFrom(data.table,.N)
importFrom(data.table,.NGRP)
importFrom(data.table,.SD)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,melt)
importFrom(data.table,merge.data.table)
importFrom(data.table,setDF)
importFrom(data.table,setnames)
importFrom(ggplot2,Facet)
importFrom(ggplot2,aes)
importFrom(ggplot2,calc_element)
importFrom(ggplot2,el_def)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_grob)
importFrom(ggplot2,element_render)
importFrom(ggplot2,find_panel)
importFrom(ggplot2,ggplotGrob)
importFrom(ggplot2,ggplot_add)
importFrom(ggplot2,ggplot_build)
importFrom(ggplot2,ggproto)
importFrom(ggplot2,ggproto_parent)
importFrom(ggplot2,margin)
importFrom(ggplot2,merge_element)
importFrom(ggplot2,register_theme_elements)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,theme_get)
importFrom(ggplot2,update_labels)
importFrom(ggplot2,waiver)
importFrom(ggplot2,wrap_dims)
importFrom(ggplot2,zeroGrob)
importFrom(grid,absolute.size)
importFrom(grid,convertHeight)
importFrom(grid,convertWidth)
importFrom(grid,editGrob)
importFrom(grid,gpar)
importFrom(grid,grid.draw)
importFrom(grid,grobHeight)
importFrom(grid,grobName)
importFrom(grid,grobWidth)
importFrom(grid,heightDetails)
importFrom(grid,is.grob)
importFrom(grid,is.unit)
importFrom(grid,unit)
importFrom(grid,unit.c)
importFrom(grid,unitType)
importFrom(grid,valid.just)
importFrom(grid,viewport)
importFrom(grid,widthDetails)
importFrom(gtable,gtable)
importFrom(gtable,gtable_add_cols)
importFrom(gtable,gtable_add_grob)
importFrom(gtable,gtable_add_rows)
importFrom(gtable,gtable_height)
importFrom(gtable,gtable_trim)
importFrom(gtable,gtable_width)
importFrom(gtable,is.gtable)
importFrom(methods,"slot<-")
importFrom(methods,extends)
importFrom(methods,show)
importFrom(methods,slot)
importFrom(rlang,.data)
importFrom(rlang,.env)
importFrom(rlang,arg_match0)
importFrom(rlang,caller_arg)
importFrom(rlang,caller_call)
importFrom(rlang,caller_env)
importFrom(rlang,cnd_signal)
importFrom(rlang,current_call)
importFrom(rlang,env_clone)
importFrom(rlang,is_empty)
importFrom(rlang,is_string)
importFrom(rlang,try_fetch)
importFrom(stats,order.dendrogram)
importFrom(stats,reorder)
importFrom(utils,getFromNamespace)
importFrom(utils,getS3method)
importFrom(utils,modifyList)
importFrom(utils,packageName)
importFrom(vctrs,data_frame)
importFrom(vctrs,df_list)
importFrom(vctrs,new_data_frame)
importFrom(vctrs,s3_register)
importFrom(vctrs,vec_cast)
importFrom(vctrs,vec_data)
importFrom(vctrs,vec_duplicate_any)
importFrom(vctrs,vec_rbind)
importFrom(vctrs,vec_seq_along)
importFrom(vctrs,vec_set_names)
importFrom(vctrs,vec_size)
importFrom(vctrs,vec_slice)
importFrom(vctrs,vec_unique_count)
importFrom(vctrs,vec_unique_loc)
