5fec4563b6325ba2f03c63fc847dafda *DESCRIPTION
b3acf0ef4f0fc6c274b4bdba1a264795 *NAMESPACE
cfacfd1424b2ddcecb93cdf201a862fb *R/ML.RatePhylo.R
266916021de69e6ec7eb21f15980e8dd *R/RatePhylo.CI.R
5a0e1ca001b4767ffd4ae9e6bd5e388f *R/RatePhylo.allCI.R
a7f9d6302257d032571078b725c8d99e *R/as.rateData.R
ff30990d49885597fd10aa48f5d13a37 *R/as.rateMatrix.R
69478c53b626b7acb0d79e243e128527 *R/cladeIdentity.R
24b69843b561a82e6dfb109698f0c72a *R/fairProportions.R
9475ff463f87a011c17e7d6c38a48924 *R/likRatePhylo.R
f289d0f9103a75861be0d05972aa7630 *R/likTraitPhylo.R
79c83a7eadfa4c7fb759d6744741e86d *R/make.anc.R
76dcf5cee60e64eda4aa15c4a18305e5 *R/make.likRatePhylo.R
30db666b98fcebbf534988d7d5391395 *R/node.descendents.R
19f267045ae258c2cb40b3b0482cbb65 *R/optim.likRatePhylo.R
e32637fb789b2db8da10ebfe49c226a3 *R/phyloCovar.R
a538af96bfc522bda61c813de1ad4837 *R/phyloMean.R
4fc6987517ba10e13b8ef835a842a40c *R/phyloVar.R
b83811d4a3438fd4d2b869e325dbf49a *R/pic.motmot.R
109cfb6220a8d40b0d197fa39d267280 *R/plotPhylo.motmot.R
a088db369cf99d4d0fab6e1b16d764bc *R/traitMedusaSummary.R
f72aa6c5eba38f68ede9c17ab8542186 *R/transformPhylo.ML.R
81d5b775aab63f5cf0d24c4e6f060d0b *R/transformPhylo.R
1d468585a58fb153a7bd0806d116358b *R/transformPhylo.ll.R
94e4ef5c2e05f03033b4b6726282a12d *R/transformPhylo.sim.R
aa18df16e28a0fa9b64b1febfcdc854e *R/transformRateMatrix.R
52230fcd58bc93e89f7f4a0398826b78 *data/anolis.data.rda
275148e9e78984b93066a8ce8989494f *data/anolis.tree.rda
fdc30b1fe00d8530a91942ea6678f099 *dataSources/anolis.data.R
4e0e08d35022f2f4fd7a75ec7a4d3092 *dataSources/anolis.data.csv
32886f5405401c7253473b8191f60e53 *dataSources/anolis.tree.R
812186cca07e3b4d3a45a747adcd1167 *dataSources/anolis.tree.nex
da80ba3741373e90aec697f5b2aac4ca *man/ML.RatePhylo.Rd
0fd7cd81cb35e27cae813e8e073461a2 *man/RatePhylo.CI.Rd
32da9fc3dabc774960d9c607df8be30d *man/RatePhylo.allCI.Rd
1b788cac73f91ad4c7df72d1cec1f8d3 *man/anolis.data.Rd
b2e160d0b39e34dab765f779b5b62b6d *man/anolis.tree.Rd
6fe48331b26f705f96fc58517aeccd5d *man/as.rateData.Rd
db8c4600def3db782467a5faeff11dfd *man/as.rateMatrix.Rd
ae00a3f68c1086c282703567d0b5c9ab *man/cladeIdentity.Rd
ba6ddf83ed1bcc3f81054cf1a16e6d61 *man/fairProportions.Rd
a518e866430a2bc7f7710a08b9857368 *man/likRatePhylo.Rd
e2df6e01866c17dbafc7e0c7630fc224 *man/likTraitPhylo.Rd
7c1d0c00da6f5f7c88515f6f7be69127 *man/make.anc.Rd
39b4a34901ef01e713d186086a6abe8b *man/make.likRatePhylo.Rd
9ef746f14c3379e3966a465b297afaa7 *man/motmot-package.Rd
e638444526d83136f28caa5cd60e6dfb *man/node.descendents.Rd
b793c6e736ade1969043fcb5c6ee6739 *man/optim.likRatePhylo.Rd
a61c9facd3fe4f16a2930ba12986b738 *man/phyloCovar.Rd
caa151dc3fb9ca819173f75eeb4b6c67 *man/phyloMean.Rd
482cc2284714c0e4ad66361a12cf61a0 *man/phyloVar.Rd
37e8d62402da8afeeb454b2a84b67980 *man/pic.motmot.Rd
968dcfd90a9e42c9f1852b7266dff1e3 *man/plotPhylo.motmot.Rd
581767912020a0e27694e955f4d2136e *man/traitMedusaSummary.Rd
b3d20c1c134b84495bbfdd7fd3ca6b03 *man/transformPhylo.ML.Rd
2e5f535fa6f1a2c173de944ba6388812 *man/transformPhylo.Rd
8974b0cdb5ef8926f16a40c719862fc7 *man/transformPhylo.ll.Rd
7d90588b65a8a5a361ac7a5db2d6f665 *man/transformPhylo.sim.Rd
5d0eaaecc3d080dea8e1aa0a8567e949 *man/transformRateMatrix.Rd
