1fa95eb7b59a938cfbc20f5016d95e2e *DESCRIPTION
22d85e56317ae7d6ffc596b4cbbb89b8 *NAMESPACE
52f338e223286b5465cf18e02a605271 *NEWS.md
64a53e38f5b2dff7932b29dd7ec9f7a9 *R/absorbLayer.R
e76fa13186175dc54713cb281759600c *R/add_image.R
59e72735338d04778dbe1d8d31f9d7b1 *R/adjust_colors.R
71bb0975da0105e25f2cfeb41c134fc5 *R/apply_imager_operation.R
bda1ad2dcc547a0b8cc017d338c61b02 *R/assignPixels.R
06908d75b5e39c9a1a3919701df01871 *R/backgroundCondition.R
1ad40e9547f6d72d1287f48efad3935a *R/backgroundIndex.R
81b182ad5ac4352819a0eb48ad1dae33 *R/blurImage.R
41a57dbbab646165439c8eeadb5916ae *R/brick_to_array.R
a23dae104eb722ca0d8265c21012413f *R/cielab_coldist.R
67f79240b6984a0aa7128b3933fe07bb *R/cimgConversions.R
ebfeafe9dccc6238de9777815b022dbc *R/collapse_expand.R
903c74775d9a921443b5141662b62a16 *R/colorClusters.R
b969c97207748a4dc06d8c5669e4956b *R/colorResiduals.R
426b99b72d05f0e3e93b00b256dcbd64 *R/constructImage.R
94efb59ed64396837be5c29344205fc0 *R/editLayers.R
db7a206c47ef2cdbecf5d211842f7595 *R/hclust_color.R
cd76b1e148ea241523ab8f8d3a6fdbcb *R/imDist.R
16b586ca08a6631ab97fc68b12830100 *R/imposeColors.R
80d6aea202ec5f4aaac4b0cbc2d6d20e *R/mergeLayers.R
d9caee3b9c6bb557a955c198fa89c397 *R/pixelAssignMatrix.R
942ee45a22a155e1bd39b37973fe9842 *R/plotColorClusters.R
83c9092af3931eb02cba1e1060d8d00d *R/plotColorPalette.R
1fb86aee940c9bfd7c1e221ed82e574a *R/plotImageArray.R
f7eb130ff88cf6f34976db6e88a66229 *R/plot_recolorize.R
8f800de7bc8f822814f4ca52f0b979be *R/raster_array_conversions.R
aaccad27f8a85a5e613c9bb19942fc3a *R/readImage.R
b1ff9382906bbcd1446a950d4b9c06aa *R/recluster.R
e9dbe04897feeb3ca10f5c08cb54d357 *R/recolorImage.R
16bee814e9a141739c69836a26f47e66 *R/recolorize.R
30720f9c62e20ef89bc565acd03b63be *R/recolorize2.R
3199a2ba4fc16f2ca16618a2ed8a693a *R/recolorizeVector.R
875f1c828dc84cb6452a01296f0b316c *R/recolorize_adjacency.R
944f8b887a1f16aa52dbf7826b28ad08 *R/recolorize_to_patternize.R
33865dde50f1504c90909a36665b0349 *R/recolorize_to_png.R
3ffc7168a3403416b3f206dfc2e8c9c7 *R/rerun_recolorize.R
c1c99b88ded954d13c25ae36560617ca *R/splitByColor.R
4a22a0bbd00fa375dd8de2291363ef3c *R/thresholdRecolor.R
29457d071db9f75cb34cf57893ba2861 *R/wernerColor.R
9c749711ab86565c977811887e85435c *README.md
9f01b9228ed2b9318f8dcddf67a0a2b4 *build/vignette.rds
8ad3a87fa62c7bdfe4b531d008c972a8 *data/werner.rda
3b8d9efe23a543380f869eef8c78330c *inst/doc/Introduction.R
758ff9567c922aa1a7bdc2c5655abf18 *inst/doc/Introduction.Rmd
6dd1ab3f6618f16b10c3376128dcbbf6 *inst/doc/Introduction.html
ef3a322efa97ea2ef39c499e84de3dd0 *inst/doc/step00_prep.R
421f4d141a353bd5b9b76c80e781a5c8 *inst/doc/step00_prep.Rmd
1c0d95e6045d72c04449c43e3b7e6f09 *inst/doc/step00_prep.html
ffdf68c4f15dfb04bf74977a65abebed *inst/doc/step01_loading.R
fa98e26e6c072342f6ac7a460248dcf8 *inst/doc/step01_loading.Rmd
0b63a40dfde7757cff1bb51c82457dc3 *inst/doc/step01_loading.html
63947448f207bc303ce243c7dc0b95cd *inst/doc/step02_initial_cluster.R
9a839dbd3d46478a998b3e14378b7da3 *inst/doc/step02_initial_cluster.Rmd
7748247b58d3dae1d764c1f3fa2f6e49 *inst/doc/step02_initial_cluster.html
51718a2b265bd5e2b53b573dc8bce318 *inst/doc/step03_refinement.R
1d5ce1a4504c14b5294bd0213f1ead28 *inst/doc/step03_refinement.Rmd
f2118c21785714fc506d5e5f37649f75 *inst/doc/step03_refinement.html
aa1de28b63121549ea11e8f3c606d9aa *inst/doc/step04_manual_tweak.R
2dff6834bd4f0ce181c0351eaf987004 *inst/doc/step04_manual_tweak.Rmd
8ab08230bcaf0b4753c1dee26ef1d6d7 *inst/doc/step04_manual_tweak.html
c6ad8e5acba8a4568fda2b8f8227bc34 *inst/doc/step05_visualization_export.R
dc7d7452e0982804185e2d7aca59898f *inst/doc/step05_visualization_export.Rmd
7b6f5bad3f4ab7df34dbefd6a67660d3 *inst/doc/step05_visualization_export.html
2b05f9c8341e27616949ceb2a0a5b782 *inst/extdata/chongi.png
76ac647666fec1525dd8fa0b8e5fa323 *inst/extdata/corbetti.png
f2dbf33eeefba84056a157050ef8eeb0 *inst/extdata/ephippigera.png
dd7850ae4e2be590a708de5add35a58f *inst/extdata/fulgidissima.png
3ddcfbb596935800bf9913777bfd6b7f *inst/extdata/msc/chongi_white.jpg
697b2b1cc53f8be461d73ba08182a243 *inst/extdata/msc/corbetti_vector.rds
a9f385c5e92eed27cd78370851b38b74 *inst/extdata/ocellata.png
c55e23d7c254e7c8103f86a1c11ec0b3 *man/absorbLayer.Rd
9d04ec25dd33625e9c2a71478d3fede3 *man/add_image.Rd
7e9116fe7a3aa0117b2cbb759826db02 *man/adjust_color.Rd
bacf6bb4018a6574a5d4d72aac8cb344 *man/apply_imager_operation.Rd
a683a8deee4a800536a6b6b9427ce6ae *man/array_to_RasterStack.Rd
760e73f8b5e9bb11e108309995e56afa *man/array_to_cimg.Rd
c6cade8403596b28e38770626fe18447 *man/assignPixels.Rd
0ca2b426c478682f1303d72a5af47f22 *man/backgroundCondition.Rd
02184e2c6cc085b213fccdd4ff6e45ca *man/backgroundIndex.Rd
80c8f4aa8fac50248117a71c83410a3f *man/blurImage.Rd
2902d890aa46061607cee717cca85a00 *man/brick_to_array.Rd
4adba20376b555bb7e98b7506daa07af *man/cielab_coldist.Rd
d297f1c2dd6f14c25334bfaec5dc310d *man/cimg_to_array.Rd
1ca377fb0234a7fe95320751763b2bd3 *man/classify_recolorize.Rd
136abf3ddcde22c4ce5753ec9a9c294d *man/clean_merge_params.Rd
179c0585a02474ff5b2dda4efc160c53 *man/col2col.Rd
dcaa6ccdd79f86784c1e7f751d5d9125 *man/colorClusters.Rd
9a550a49da922938f2d8f857c607860b *man/colorClustersHist.Rd
9be74982eee932047e0110bd166e2618 *man/colorClustersKMeans.Rd
722d3ab1fa308cbb42749efdd7b9968a *man/colorResiduals.Rd
cb8d9204936f9e76fcd7e95aa601bcec *man/constructImage.Rd
a8b3d6cb5a3554f2c98d192d57dda129 *man/editLayer.Rd
cc3f9f65b08bf5b2425515fe86a6c425 *man/editLayers.Rd
13bf4083466182887e0174924653671d *man/expand_recolorize.Rd
8287d5d0746ab693120400a7afd0d952 *man/hclust_color.Rd
e55b4bd455941df7e1ee2e0d7da93930 *man/imDist.Rd
a1875f41e8123d4de6fefcd791c6a50d *man/imHeatmap.Rd
87ca4547e2f77989458dc51050bb86fa *man/imposeColors.Rd
3dee9848a1b808e41d3f95e742f9d29f *man/labelCol.Rd
604db0407545e1c1889933fc57408c7b *man/mergeLayers.Rd
6a84c605a3b08c510fcbb489a9ce9f6f *man/pixelAssignMatrix.Rd
0e57eef6c7ca87140a0683f2f211d62b *man/plot.recolorize.Rd
98fc613457b0be62ba4371aaebf5b637 *man/plot.recolorizeVector.Rd
ea68fa004d005bd8125c01b88d38ce06 *man/plotColorClusters.Rd
43f35b69d0dd527233b4a8b3017ae349 *man/plotColorPalette.Rd
7370f981223052e34f162aeb02bf4c49 *man/plotImageArray.Rd
f39e1e97b70c9e30fd5654aef0c731d0 *man/raster_to_array.Rd
dd40a87586e38e05cacba496e7724d8d *man/readImage.Rd
9d7c44f301f4c0278b06a14ee868bb66 *man/recluster.Rd
b97d9d34fe7c04ceec419001ba77f9b8 *man/recoloredImage.Rd
491eb1d8ea756ea8c9e5a7002df81437 *man/recolorize.Rd
931bb27f216db1ab1d0f5fe0a3945fa0 *man/recolorize2.Rd
a9d58b95380dbdf2e08889eda4b6b1d6 *man/recolorizeVector.Rd
93e77ebc2ddd3c3b117f80db168eebd1 *man/recolorize_adjacency.Rd
fc86cea3e8cd34bab06a7f4472eb1d9f *man/recolorize_to_patternize.Rd
3232a6578eb9d326a02322221a35622e *man/recolorize_to_png.Rd
1347cf0b6d8347630ad63a8386923bae *man/rerun_recolorize.Rd
71dc89e5d3a3e70d071767d8691acbbf *man/rgb2hsl.Rd
a4a5795bd0bf8040e4ef9760bee7b779 *man/splitByColor.Rd
f0bfa62d4553a072e4ee87d9736b56b7 *man/thresholdRecolor.Rd
2903348d4d868be01e145b1cb34811b0 *man/werner.Rd
cb7589a764c23be13898a6e8e9fc218f *man/wernerColor.Rd
758ff9567c922aa1a7bdc2c5655abf18 *vignettes/Introduction.Rmd
421f4d141a353bd5b9b76c80e781a5c8 *vignettes/step00_prep.Rmd
fa98e26e6c072342f6ac7a460248dcf8 *vignettes/step01_loading.Rmd
9a839dbd3d46478a998b3e14378b7da3 *vignettes/step02_initial_cluster.Rmd
1d5ce1a4504c14b5294bd0213f1ead28 *vignettes/step03_refinement.Rmd
2dff6834bd4f0ce181c0351eaf987004 *vignettes/step04_manual_tweak.Rmd
dc7d7452e0982804185e2d7aca59898f *vignettes/step05_visualization_export.Rmd
