Last updated on 2025-07-21 20:50:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.13 | 259.77 | 270.90 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 178.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 168.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.480, system: 0.045, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.988, system: 0.101, elapsed: 11.830 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.669, system: 0.191, elapsed: 5.292 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.040, system: 0.379, elapsed: 20.619 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.482, system: 0.034, elapsed: 1.971 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.890, system: 0.086, elapsed: 13.511 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.312 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.627, system: 0.154, elapsed: 6.576 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.304 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.868, system: 0.304, elapsed: 23.520 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.511, system: 0.027, elapsed: 2.815 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.885, system: 0.060, elapsed: 18.204 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.509 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.172, elapsed: 7.313 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.210 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.154, system: 0.216, elapsed: 1.056 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.178, system: 0.511, elapsed: 31.277 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.472, system: 0.033, elapsed: 2.044 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.910, system: 0.091, elapsed: 11.802 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.666, system: 0.177, elapsed: 4.866 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.206 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.281, system: 0.460, elapsed: 16.246 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.323, system: 0.807, elapsed: 36.343 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.044, elapsed: 1.725 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.875, system: 0.087, elapsed: 10.586 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.600, system: 0.182, elapsed: 4.750 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.158 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.872, system: 0.352, elapsed: 18.091 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.474, system: 0.030, elapsed: 1.579 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.748, system: 0.049, elapsed: 10.384 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.389 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.639, system: 0.162, elapsed: 6.619 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.252 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.738, system: 0.278, elapsed: 19.933 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.033, elapsed: 2.556 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.941, system: 0.061, elapsed: 15.259 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.482, system: 0.161, elapsed: 5.774 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.260 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.050, system: 0.221, elapsed: 1.011 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.984, system: 0.532, elapsed: 26.227 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.465, system: 0.028, elapsed: 2.544 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.950, system: 0.049, elapsed: 12.515 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.177, elapsed: 5.334 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.241 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.935, system: 0.496, elapsed: 14.059 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.897, system: 0.794, elapsed: 36.081 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64