Last updated on 2025-11-08 19:51:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.93 | 258.73 | 271.66 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.06 | 204.67 | 214.73 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 177.00 | 189.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 14.00 | 186.00 | 200.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.057, elapsed: 2.722 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.501, system: 0.130, elapsed: 12.751 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.903, system: 0.217, elapsed: 4.604 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.176 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.960, system: 0.451, elapsed: 21.241 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.042, elapsed: 1.704 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.234, elapsed: 12.087 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.015, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.194, system: 0.257, elapsed: 6.483 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.008, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.288, system: 0.584, elapsed: 21.556 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.787, system: 0.071, elapsed: 2.987 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.785, system: 0.262, elapsed: 14.801 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.017, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.155, system: 0.294, elapsed: 6.812 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.268 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.280, system: 0.252, elapsed: 1.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.012, system: 0.935, elapsed: 27.484 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.798, system: 0.070, elapsed: 2.927 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.796, system: 0.307, elapsed: 12.702 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.017, elapsed: 0.242 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.144, system: 0.312, elapsed: 5.625 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.264 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.172, system: 0.745, elapsed: 23.161 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.952, system: 1.508, elapsed: 45.922 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.068, elapsed: 3.246 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.583, system: 0.181, elapsed: 15.592 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.016, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.845, system: 0.240, elapsed: 5.233 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.208 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.075, system: 0.545, elapsed: 25.526 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.767, system: 0.061, elapsed: 2.056 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.469, system: 0.161, elapsed: 11.731 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.016, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.632, system: 0.181, elapsed: 4.254 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.013, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.803, system: 0.472, elapsed: 19.344 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.944, system: 0.112, elapsed: 3.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.836, system: 0.366, elapsed: 14.158 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.378 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.842, system: 0.189, elapsed: 8.454 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.013, elapsed: 0.404 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.112, system: 0.248, elapsed: 1.591 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.751, system: 0.988, elapsed: 29.258 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.643, system: 0.040, elapsed: 3.157 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.546, system: 0.108, elapsed: 16.822 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.397 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.178, elapsed: 6.761 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.003, elapsed: 0.285 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.664, system: 0.482, elapsed: 20.094 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.651, system: 0.852, elapsed: 48.712 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64