Type: | Package |
Title: | R Commander Plug-in for Repeated-Measures ANOVA |
Version: | 0.0.6 |
Date: | 2025-05-06 |
Author: | Arnaud Travert |
Maintainer: | Arnaud Travert <arnaud.travert@unicaen.fr> |
Depends: | R (≥ 3.2.0) |
Imports: | Rcmdr |
Suggests: | knitr |
Description: | R Commander plug-in for repeated-measures and mixed-design ('split-plot') ANOVA. It adds a new menu entry for repeated measures that allows to deal with up to three within-subject factors and optionally with one or several between-subject factors. It also provides supplementary options to oneWayAnova() and multiWayAnova() functions, such as choice of ANOVA type, display of effect sizes and post hoc analysis for multiWayAnova(). |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
LazyLoad: | yes |
LazyData: | yes |
NeedsCompilation: | no |
RoxygenNote: | 7.3.2 |
VignetteBuilder: | knitr |
Packaged: | 2025-05-06 11:31:37 UTC; Arnaud |
Repository: | CRAN |
Date/Publication: | 2025-05-06 12:20:05 UTC |
Status, Authoritarianism, and Conformity
Description
The Moore
data frame has 45 rows and 4 columns.
The data are for subjects in a social-psychological experiment,
who were faced with manipulated disagreement from a partner of either
of low or high status. The subjects could either conform to the
partner's judgment or stick with their own judgment.
Usage
Moore
Format
This data frame contains the following columns:
- partner.status
-
Partner's status. A factor with levels:
high
,low
. - conformity
-
Number of conforming responses in 40 critical trials.
- fcategory
-
F-Scale Categorized. A factor with levels (note levels out of order):
high
,low
,medium
. - fscore
-
Authoritarianism: F-Scale score.
Source
Moore, J. C., Jr. and Krupat, E. (1971) Relationship between source status, authoritarianism and conformity in a social setting. Sociometry 34, 122–134.
Personal communication from J. Moore, Department of Sociology, York University.
References
Fox, J. (2008) Applied Regression Analysis and Generalized Linear Models, Second Edition. Sage.
Fox, J. and Weisberg, S. (2011) An R Companion to Applied Regression, Second Edition, Sage.
O'Brien and Kaiser's Repeated-Measures Data
Description
These contrived repeated-measures data are taken from O'Brien and Kaiser (1985). The data are from an imaginary study in which 16 female and male subjects, who are divided into three treatments, are measured at a pretest, postest, and a follow-up session; during each session, they are measured at five occasions at intervals of one hour. The design, therefore, has two between-subject and two within-subject factors.
The contrasts for the treatment
factor are set to -2, 1, 1
and
0, -1, 1
. The contrasts for the gender
factor are set to
contr.sum
.
Usage
OBrienKaiser
Format
A data frame with 16 observations on the following 17 variables.
treatment
a factor with levels
control
A
B
gender
a factor with levels
F
M
pre.1
pretest, hour 1
pre.2
pretest, hour 2
pre.3
pretest, hour 3
pre.4
pretest, hour 4
pre.5
pretest, hour 5
post.1
posttest, hour 1
post.2
posttest, hour 2
post.3
posttest, hour 3
post.4
posttest, hour 4
post.5
posttest, hour 5
fup.1
follow-up, hour 1
fup.2
follow-up, hour 2
fup.3
follow-up, hour 3
fup.4
follow-up, hour 4
fup.5
follow-up, hour 5
Source
O'Brien, R. G., and Kaiser, M. K. (1985) MANOVA method for analyzing repeated measures designs: An extensive primer. Psychological Bulletin 97, 316–333, Table 7.
Examples
OBrienKaiser
contrasts(OBrienKaiser$treatment)
contrasts(OBrienKaiser$gender)
Chemical Composition of Pottery
Description
The data give the chemical composition of ancient pottery found at four sites in Great Britain. They appear in Hand, et al. (1994), and are used to illustrate MANOVA in the SAS Manual. (Suggested by Michael Friendly.)
Usage
Pottery
Format
A data frame with 26 observations on the following 6 variables.
Site
a factor with levels
AshleyRails
Caldicot
IsleThorns
Llanedyrn
Al
Aluminum
Fe
Iron
Mg
Magnesium
Ca
Calcium
Na
Sodium
Source
Hand, D. J., Daly, F., Lunn, A. D., McConway, K. J., and E., O. (1994) A Handbook of Small Data Sets. Chapman and Hall.
Examples
Pottery
Generalized Linear Model
Description
This is a minor modification of generalizedLinearModel
where size effects are computed and displayed for logistic regression
Usage
generalizedLinearModel_()
See Also
Multiway ANOVA
Description
This is a modification of Rcmdr::multiWayAnova()
where supplementary options have been added.
Usage
multiWayAnova_()
Details
Options:
'SS type'
: type of sum of squared, default:type = 2
. See Details inAnova
'Effect size'
: compute and prints effect size (partial eta squares)'Summary statistics for groups'
: prints summary statistics for groups formed by all combinatuions of factors'Pairwise comparisons of means'
: performs post-hoc Tukey's HSD test on significant (p < .05) or close to significant (p < 0.1) effects.
On OK, the following operations are carried out:
Computes ANOVA using
Anova
Computes effect sizes (partial eta squared)
Prints a summary of marginal statistics (count, min, max, mean, ds)
runs post-hoc analysis on significant or close to significant effects
-
Generates an 'extended' dataset (extension
.ext
) containing additionak columns'<factorA.factorB:...>'
that allows differentiate measures from groups or subjects with same factors levels. This 'extended' dataset is useful for ploting means and post-hoc analysis
Value
None
See Also
Anova
for the computation of ANOVA
One way ANOVA
Description
This is a modification of Rcmdr::oneWayAnova()
where supplementary options have been added.
Usage
oneWayAnova_()
Details
Options:
'Effect size'
: compute and prints effect size (partial eta squared)'Summary statistics for groups'
: prints summary statistics for groups formed by the beween subject factor'Pairwise comparisons of means'
: performs post-hoc Tukey's HSD test.
On OK, the following operations are carried out:
Computes ANOVA using
aov
Computes effect sizes (partial eta squared)
Prints a summary of marginal statistics (count, min, max, mean, ds)
runs post-hoc analysis
Value
None
See Also
aov
for the computation of ANOVA
Repeated measures ANOVA
Description
Dialog box to (i) select the within-subject variables corresponding
to the factors defined in repMeasAnovaSetup
, (ii) select the
between-suject factors, (iii) set options and (iv) launch the repeated
measures anova.
Usage
repMeasAnova(.withinfactors, .withinlevels)
Arguments
.withinfactors |
list of within-subject factors |
.withinlevels |
list of within-subject variables |
Details
Options:
'SS type'
: type of sum of squares, default:type = 2
. See Details inAnova
'Effect size'
: compute and prints effect size (partial eta squared)'Summary statistics for groups'
: prints summary statistics for groups formed by all combinations of factors'Pairwise comparisons of means'
: performs post-hoc Tukey's HSD test on significant (p < .05) or close to significant (p < 0.1) effects.
On OK, the following operations are carried out:
-
Generates a dataset containing complete cases and converted from 'wide' to 'long' format (extension
.cplt.lg
), with the following columns added:'id'
(factor): identifies the subjects.'DV'
(numeric): the measure or dependent variable.'trial'
(int): variable that differentiates multiple measures ('DV'
) from the same subject ('id'
).-
'<factorA>'
(factor): levels of the within-suject factor A (one column per within subject factor) -
'<factorA.factorB:...>'
(factor): factor that differentiates multiple measures from groups or subjects with same factors levels
This 'long' dataset is useful for ploting means and post-hoc analysis
Computes repeated measure ANOVA using
Anova
Computes effect sizes (partial eta squared)
Prints a summary of marginal statistics (count, min, max, mean, ds)
runs post-hoc analysis on significant or close to significant effects
Value
None
Author(s)
Jessica Mange jessica.mange@unicaen.fr
Arnaud Travert arnaud.travert@unicaen.fr
See Also
repMeasAnovaSetup
for the definition of
within factors, Anova
for the computation of ANOVA
Repeated measure ANOVA setup
Description
Dialog box to enter the names and levels of within-factors.
Usage
repMeasAnovaSetup()
Details
Up to three factors can be entered. A valid within-factor entry must consist in a syntactically valid name (see make.names) and 2 levels or more.
On OK:
-
The first valid entries are kept and stored in
.withinfactors
and.withinlevels
for factor names and levels, respectively. -
The next dialog box (
repMeasAnova(.withinfactors, .withinfactors)
is launched.
Author(s)
Jessica Mange jessica.mange@unicaen.fr
Arnaud Travert arnaud.travert@unicaen.fr