Functions for estimating times of common ancestry and molecular clock rates of evolution using a variety of evolutionary models, parametric and nonparametric bootstrap confidence intervals, methods for detecting outlier lineages, root-to-tip regression, and a statistical test for selecting molecular clock models. For more details see Volz and Frost (2017) <doi:10.1093/ve/vex025>.
Version: | 1.0.2 |
Depends: | ape (≥ 5.0), limSolve (≥ 1.5.5.0) |
Suggests: | lubridate, ggplot2, foreach, iterators, mgcv, knitr, rmarkdown |
Published: | 2025-09-03 |
DOI: | 10.32614/CRAN.package.treedater |
Author: | Erik Volz [aut, cre] |
Maintainer: | Erik Volz <erik.volz at gmail.com> |
License: | GPL-2 |
NeedsCompilation: | no |
Materials: | README |
In views: | Phylogenetics |
CRAN checks: | treedater results |
Reference manual: | treedater.html , treedater.pdf |
Vignettes: |
H3N2 (source, R code) |
Package source: | treedater_1.0.2.tar.gz |
Windows binaries: | r-devel: treedater_1.0.2.zip, r-release: not available, r-oldrel: not available |
macOS binaries: | r-release (arm64): treedater_1.0.2.tgz, r-oldrel (arm64): not available, r-release (x86_64): treedater_1.0.2.tgz, r-oldrel (x86_64): treedater_1.0.2.tgz |
Old sources: | treedater archive |
Please use the canonical form https://CRAN.R-project.org/package=treedater to link to this page.